Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm29543-201ENSMUST00000188138 967 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm18730-201ENSMUST00000218038 343 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm8385-201ENSMUST00000058999 643 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm7967-202ENSMUST00000191042 5042 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm37671-201ENSMUST00000193198 2096 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Snord17-201ENSMUST00000104526 238 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Mir877-201ENSMUST00000104738 85 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm11783-201ENSMUST00000119549 885 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm16505-201ENSMUST00000179981 232 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm7003-201ENSMUST00000195089 312 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm2965-201ENSMUST00000198365 343 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm6722-201ENSMUST00000221586 390 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 AC126459.1-201ENSMUST00000214791 2123 ntBASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ube4bQ9ES00 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm12196-201ENSMUST00000120954 262 ntBASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms