Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm11619-201ENSMUST00000117474 237 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm24809-201ENSMUST00000175318 271 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm19587-201ENSMUST00000191395 545 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm37852-201ENSMUST00000193027 350 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm43097-201ENSMUST00000196867 151 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp2aQ9DB34 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp2aQ9DB34 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm20392-201ENSMUST00000173047 701 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm19918-201ENSMUST00000194858 400 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm4604-201ENSMUST00000025040 390 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.14□□□□□ -0.63
Chmp2aQ9DB34 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms