Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44216-201ENSMUST00000203942 157 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm32390-201ENSMUST00000212713 1172 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm17192-201ENSMUST00000169031 511 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm23153-201ENSMUST00000175323 313 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Mir7035-201ENSMUST00000184713 82 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm43930-201ENSMUST00000203868 845 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm18514-201ENSMUST00000218980 436 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm3619-201ENSMUST00000219947 775 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm5805-201ENSMUST00000072779 456 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.08□□□□□ -0.8
Clrn1Q8K445 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm25053-201ENSMUST00000103982 133 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms