Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm27441-201ENSMUST00000185000 105 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm44420-201ENSMUST00000203669 490 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm9204-201ENSMUST00000212641 947 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm10238-201ENSMUST00000089689 408 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh3rf2Q8BZT2 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm24933-201ENSMUST00000103762 110 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm23252-201ENSMUST00000103776 110 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm16209-201ENSMUST00000118457 627 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm10171-201ENSMUST00000126220 628 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm26443-201ENSMUST00000179610 110 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm7765-201ENSMUST00000182585 974 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm7985-201ENSMUST00000183329 981 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Mir6953-201ENSMUST00000184745 68 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm7238-201ENSMUST00000206467 973 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm9619-201ENSMUST00000211587 762 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm10233-201ENSMUST00000089275 628 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sh3rf2Q8BZT2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sh3rf2Q8BZT2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sh3rf2Q8BZT2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms