Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm17944-201ENSMUST00000186351 643 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm42710-201ENSMUST00000200608 985 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm44540-201ENSMUST00000205640 354 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm26943-201ENSMUST00000182295 957 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm7833-201ENSMUST00000183288 990 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm37597-201ENSMUST00000191853 382 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm6439-201ENSMUST00000199849 862 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm45310-201ENSMUST00000210436 275 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm18122-201ENSMUST00000211390 904 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm5040-201ENSMUST00000218609 800 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm9701-201ENSMUST00000077976 427 ntBASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp6nlQ80XC3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm10537-201ENSMUST00000192625 1698 ntBASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm14639-201ENSMUST00000120850 866 ntBASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm8525-201ENSMUST00000189674 861 ntBASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm38233-201ENSMUST00000194259 807 ntBASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Gm17936-201ENSMUST00000199413 988 ntBASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.84□□□□□ -0.51
Usp6nlQ80XC3 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms