Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.59□□□□□ -0.55
Col9a2Q07643 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.59□□□□□ -0.55
Col9a2Q07643 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Gm6331-201ENSMUST00000217890 450 ntBASIC11.59□□□□□ -0.55
Col9a2Q07643 Gm8557-201ENSMUST00000220777 475 ntBASIC11.59□□□□□ -0.55
Col9a2Q07643 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.59□□□□□ -0.55
Col9a2Q07643 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col9a2Q07643 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a2Q07643 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col9a2Q07643 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col9a2Q07643 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Col9a2Q07643 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col9a2Q07643 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm14006-201ENSMUST00000122132 981 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Mir6359-201ENSMUST00000183668 81 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col9a2Q07643 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm19891-201ENSMUST00000189771 303 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm42803-201ENSMUST00000201051 451 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.58□□□□□ -0.56
Col9a2Q07643 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a2Q07643 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a2Q07643 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm22495-201ENSMUST00000104492 126 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm5510-201ENSMUST00000117826 486 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm6500-201ENSMUST00000119412 451 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm19087-201ENSMUST00000191430 946 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm8022-201ENSMUST00000191763 904 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm29808-201ENSMUST00000194419 468 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm38349-201ENSMUST00000195732 462 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm42710-201ENSMUST00000200608 985 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm44420-201ENSMUST00000203669 490 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm18862-201ENSMUST00000204643 933 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.57□□□□□ -0.56
Col9a2Q07643 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms