Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Smn1P97801 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Gm16518-201ENSMUST00000117960 508 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Gm11956-201ENSMUST00000119525 512 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.11□□□□□ -0.95
Smn1P97801 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.11□□□□□ -0.95
Smn1P97801 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smn1P97801 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.11□□□□□ -0.95
Smn1P97801 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.11□□□□□ -0.95
Smn1P97801 Gm27341-201ENSMUST00000183570 106 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Gm37826-201ENSMUST00000195329 322 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Gm5599-201ENSMUST00000209602 788 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.11□□□□□ -0.95
Smn1P97801 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Gm5451-201ENSMUST00000080545 579 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smn1P97801 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Smn1P97801 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smn1P97801 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.11□□□□□ -0.95
Smn1P97801 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smn1P97801 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.1□□□□□ -0.95
Smn1P97801 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.1□□□□□ -0.95
Smn1P97801 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Smn1P97801 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.1□□□□□ -0.95
Smn1P97801 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Mir877-201ENSMUST00000104738 85 ntBASIC9.1□□□□□ -0.95
Smn1P97801 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.1□□□□□ -0.95
Smn1P97801 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.1□□□□□ -0.95
Smn1P97801 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.1□□□□□ -0.95
Smn1P97801 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Smn1P97801 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.1□□□□□ -0.95
Smn1P97801 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.1□□□□□ -0.95
Smn1P97801 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.1□□□□□ -0.95
Smn1P97801 AC132446.1-201ENSMUST00000222655 226 ntBASIC9.1□□□□□ -0.95
Smn1P97801 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Smn1P97801 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Smn1P97801 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.1□□□□□ -0.95
Smn1P97801 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smn1P97801 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Smn1P97801 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smn1P97801 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms