Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nup43P59235 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.14□□□□□ -0.79
Nup43P59235 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nup43P59235 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.13□□□□□ -0.79
Nup43P59235 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Gm14234-201ENSMUST00000119539 845 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm14913-201ENSMUST00000120011 1093 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Gm8723-201ENSMUST00000166076 820 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm8701-201ENSMUST00000169259 874 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nup43P59235 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Gm29155-201ENSMUST00000185910 269 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm36943-201ENSMUST00000194422 282 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm44155-201ENSMUST00000203923 412 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm45258-201ENSMUST00000210042 853 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm8170-201ENSMUST00000218581 945 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nup43P59235 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nup43P59235 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.13□□□□□ -0.79
Nup43P59235 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.13□□□□□ -0.79
Nup43P59235 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nup43P59235 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Nup43P59235 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.12□□□□□ -0.79
Nup43P59235 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Gm23061-201ENSMUST00000102348 116 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Gm12990-201ENSMUST00000120372 468 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nup43P59235 Gm18733-202ENSMUST00000174447 401 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.12□□□□□ -0.79
Nup43P59235 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.12□□□□□ -0.79
Nup43P59235 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.12□□□□□ -0.79
Nup43P59235 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nup43P59235 Gm4903-201ENSMUST00000210462 405 ntBASIC10.12□□□□□ -0.79
Nup43P59235 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.12□□□□□ -0.79
Nup43P59235 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms