Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.56□□□□□ -0.72
Pdx1P52946 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.56□□□□□ -0.72
Pdx1P52946 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Pdx1P52946 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm12745-201ENSMUST00000121767 214 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.56□□□□□ -0.72
Pdx1P52946 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm8194-201ENSMUST00000159783 859 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm6423-201ENSMUST00000204315 934 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 Gm31941-201ENSMUST00000209689 350 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.56□□□□□ -0.72
Pdx1P52946 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pdx1P52946 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pdx1P52946 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Pdx1P52946 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Pdx1P52946 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Pdx1P52946 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.55□□□□□ -0.72
Pdx1P52946 Gm11544-201ENSMUST00000120215 382 ntBASIC10.55□□□□□ -0.72
Pdx1P52946 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Pdx1P52946 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Pdx1P52946 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Pdx1P52946 Gm42710-201ENSMUST00000200608 985 ntBASIC10.55□□□□□ -0.72
Pdx1P52946 Gm4903-201ENSMUST00000210462 405 ntBASIC10.55□□□□□ -0.72
Pdx1P52946 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pdx1P52946 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pdx1P52946 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Pdx1P52946 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Pdx1P52946 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pdx1P52946 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.54□□□□□ -0.72
Pdx1P52946 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Pdx1P52946 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.54□□□□□ -0.72
Pdx1P52946 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Pdx1P52946 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.54□□□□□ -0.72
Pdx1P52946 Gm16288-201ENSMUST00000137940 367 ntBASIC10.54□□□□□ -0.72
Pdx1P52946 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pdx1P52946 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pdx1P52946 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pdx1P52946 Gm23647-201ENSMUST00000175042 109 ntBASIC10.54□□□□□ -0.72
Pdx1P52946 Rn5s-201ENSMUST00000177555 119 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms