Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Gm15554-201ENSMUST00000120406 913 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.32□□□□□ -0.6
Shmt1P50431 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Gm9507-202ENSMUST00000180157 654 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.32□□□□□ -0.6
Shmt1P50431 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Gm42859-201ENSMUST00000199572 193 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.32□□□□□ -0.6
Shmt1P50431 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.32□□□□□ -0.6
Shmt1P50431 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.32□□□□□ -0.6
Shmt1P50431 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt1P50431 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.32□□□□□ -0.6
Shmt1P50431 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm16441-201ENSMUST00000138176 924 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 Gm6038-201ENSMUST00000154310 948 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 Gm26208-201ENSMUST00000158677 124 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt1P50431 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm42710-201ENSMUST00000200608 985 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm6855-201ENSMUST00000206307 790 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt1P50431 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.31□□□□□ -0.6
Shmt1P50431 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Shmt1P50431 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shmt1P50431 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shmt1P50431 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.31□□□□□ -0.6
Shmt1P50431 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.31□□□□□ -0.6
Shmt1P50431 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shmt1P50431 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Shmt1P50431 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Shmt1P50431 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms