Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm13284-201ENSMUST00000121020 547 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Gm14665-201ENSMUST00000122294 557 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Rfx3P48381 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm7255-201ENSMUST00000187371 908 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.65□□□□□ -0.86
Rfx3P48381 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Rfx3P48381 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Rfx3P48381 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rfx3P48381 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rfx3P48381 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Rfx3P48381 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rfx3P48381 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Rfx3P48381 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rfx3P48381 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Rfx3P48381 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rfx3P48381 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.64□□□□□ -0.87
Rfx3P48381 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Rfx3P48381 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.64□□□□□ -0.87
Rfx3P48381 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.64□□□□□ -0.87
Rfx3P48381 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.64□□□□□ -0.87
Rfx3P48381 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Gm19459-201ENSMUST00000176240 835 ntBASIC9.64□□□□□ -0.87
Rfx3P48381 Gm10731-201ENSMUST00000181171 448 ntBASIC9.64□□□□□ -0.87
Rfx3P48381 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.64□□□□□ -0.87
Rfx3P48381 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.64□□□□□ -0.87
Rfx3P48381 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.64□□□□□ -0.87
Rfx3P48381 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.64□□□□□ -0.87
Rfx3P48381 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rfx3P48381 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rfx3P48381 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Rfx3P48381 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Rfx3P48381 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Rfx3P48381 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.63□□□□□ -0.87
Rfx3P48381 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rfx3P48381 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.63□□□□□ -0.87
Rfx3P48381 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms