Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm11235-201ENSMUST00000117763 333 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm15793-201ENSMUST00000121857 495 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm22388-201ENSMUST00000158194 248 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC10.18□□□□□ -0.78
Cdx2P43241 Mir7088-201ENSMUST00000184227 86 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm21631-201ENSMUST00000195041 754 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm6008-201ENSMUST00000206542 874 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.18□□□□□ -0.78
Cdx2P43241 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Mir341-201ENSMUST00000093593 96 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm10617-201ENSMUST00000098368 1172 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdx2P43241 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.18□□□□□ -0.78
Cdx2P43241 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdx2P43241 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cdx2P43241 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cdx2P43241 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.17□□□□□ -0.78
Cdx2P43241 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm14571-201ENSMUST00000118292 570 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm28391-201ENSMUST00000185202 379 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Gm29528-201ENSMUST00000186699 379 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Gm29526-201ENSMUST00000187217 379 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm19798-201ENSMUST00000201502 457 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm45308-201ENSMUST00000210610 415 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Gm18122-201ENSMUST00000211390 904 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC10.17□□□□□ -0.78
Cdx2P43241 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC10.17□□□□□ -0.78
Cdx2P43241 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.17□□□□□ -0.78
Cdx2P43241 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.17□□□□□ -0.78
Cdx2P43241 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdx2P43241 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms