Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.46□□□□□ -0.57
Pbx1P41778 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Pbx1P41778 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pbx1P41778 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pbx1P41778 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pbx1P41778 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.46□□□□□ -0.58
Pbx1P41778 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pbx1P41778 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pbx1P41778 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pbx1P41778 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pbx1P41778 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pbx1P41778 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pbx1P41778 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm20426-201ENSMUST00000173657 440 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.45□□□□□ -0.58
Pbx1P41778 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pbx1P41778 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pbx1P41778 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Gm44798-201ENSMUST00000208123 2410 ntBASIC11.45□□□□□ -0.58
Pbx1P41778 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pbx1P41778 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pbx1P41778 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Pbx1P41778 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Gm12791-201ENSMUST00000120788 655 ntBASIC11.44□□□□□ -0.58
Pbx1P41778 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC11.44□□□□□ -0.58
Pbx1P41778 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.44□□□□□ -0.58
Pbx1P41778 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Snora73b-201ENSMUST00000083419 205 ntBASIC11.44□□□□□ -0.58
Pbx1P41778 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pbx1P41778 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Pbx1P41778 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pbx1P41778 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pbx1P41778 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.43□□□□□ -0.58
Pbx1P41778 Gm11246-201ENSMUST00000120880 345 ntBASIC11.43□□□□□ -0.58
Pbx1P41778 Gm12950-201ENSMUST00000121683 417 ntBASIC11.43□□□□□ -0.58
Pbx1P41778 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pbx1P41778 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms