Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Chd1P40201 Gm15264-201ENSMUST00000118050 502 ntBASIC15.7■□□□□ 0.1
Chd1P40201 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Gm23927-202ENSMUST00000199928 216 ntBASIC15.7■□□□□ 0.1
Chd1P40201 9330159N22Rik-201ENSMUST00000221530 1031 ntBASIC15.7■□□□□ 0.1
Chd1P40201 Defa22-201ENSMUST00000098897 419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC15.7■□□□□ 0.1
Chd1P40201 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Gm8752-201ENSMUST00000173427 1694 ntBASIC15.7■□□□□ 0.1
Chd1P40201 AC115891.2-201ENSMUST00000218448 1341 ntBASIC15.7■□□□□ 0.1
Chd1P40201 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd1P40201 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd1P40201 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd1P40201 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Gm23220-201ENSMUST00000158115 137 ntBASIC15.69■□□□□ 0.1
Chd1P40201 4930573I07Rik-202ENSMUST00000199120 413 ntTSL 3 BASIC15.69■□□□□ 0.1
Chd1P40201 Gm34664-202ENSMUST00000207661 1032 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd1P40201 Gm45566-201ENSMUST00000209883 1168 ntBASIC15.69■□□□□ 0.1
Chd1P40201 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd1P40201 AC124686.1-201ENSMUST00000225546 522 ntBASIC15.69■□□□□ 0.1
Chd1P40201 Ermard-209ENSMUST00000226561 1019 ntBASIC15.69■□□□□ 0.1
Chd1P40201 1700109K24Rik-202ENSMUST00000227532 1030 ntBASIC15.69■□□□□ 0.1
Chd1P40201 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Hsd17b6-202ENSMUST00000219183 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd1P40201 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Tollip-203ENSMUST00000130439 1892 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd1P40201 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chd1P40201 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chd1P40201 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd1P40201 Gm44198-201ENSMUST00000203063 2636 ntBASIC15.69■□□□□ 0.1
Chd1P40201 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Gm3534-201ENSMUST00000182522 1001 ntBASIC15.68■□□□□ 0.1
Chd1P40201 Gm27500-201ENSMUST00000184331 336 ntBASIC15.68■□□□□ 0.1
Chd1P40201 Gm27483-201ENSMUST00000184983 71 ntBASIC15.68■□□□□ 0.1
Chd1P40201 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chd1P40201 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chd1P40201 AC161763.1-201ENSMUST00000227063 168 ntBASIC15.68■□□□□ 0.1
Chd1P40201 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Chd1P40201 Csl-201ENSMUST00000056085 1953 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chd1P40201 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chd1P40201 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Chd1P40201 2810455O05Rik-201ENSMUST00000138442 1691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chd1P40201 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd1P40201 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chd1P40201 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC15.68■□□□□ 0.1
Chd1P40201 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 4930473H19Rik-202ENSMUST00000222124 1000 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd1P40201 1810011H11Rik-202ENSMUST00000227060 496 ntBASIC15.68■□□□□ 0.1
Chd1P40201 Rpl21-ps12-201ENSMUST00000080061 480 ntBASIC15.68■□□□□ 0.1
Chd1P40201 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd1P40201 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd1P40201 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd1P40201 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd1P40201 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd1P40201 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Chd1P40201 AC154729.1-201ENSMUST00000224481 1501 ntBASIC15.67■□□□□ 0.1
Chd1P40201 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Chd1P40201 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC15.67■□□□□ 0.1
Chd1P40201 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd1P40201 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms