Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC154352.1-201ENSMUST00000221477 2365 ntBASIC12.45□□□□□ -0.42
Traf1P39428 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Traf1P39428 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.45□□□□□ -0.42
Traf1P39428 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Traf1P39428 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Traf1P39428 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf1P39428 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Traf1P39428 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Traf1P39428 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Traf1P39428 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.45□□□□□ -0.42
Traf1P39428 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Traf1P39428 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Traf1P39428 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Traf1P39428 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Traf1P39428 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Traf1P39428 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Gm5526-201ENSMUST00000153604 423 ntBASIC12.44□□□□□ -0.42
Traf1P39428 Gm20414-201ENSMUST00000172918 646 ntBASIC12.44□□□□□ -0.42
Traf1P39428 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.44□□□□□ -0.42
Traf1P39428 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Mir8111-201ENSMUST00000184463 137 ntBASIC12.44□□□□□ -0.42
Traf1P39428 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Traf1P39428 Gm43564-201ENSMUST00000196185 211 ntBASIC12.44□□□□□ -0.42
Traf1P39428 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.44□□□□□ -0.42
Traf1P39428 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Traf1P39428 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.44□□□□□ -0.42
Traf1P39428 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.44□□□□□ -0.42
Traf1P39428 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Traf1P39428 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Gm42571-201ENSMUST00000201197 2464 ntBASIC12.44□□□□□ -0.42
Traf1P39428 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Traf1P39428 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.43□□□□□ -0.42
Traf1P39428 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Gm13094-201ENSMUST00000117930 409 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Gm6425-201ENSMUST00000136332 790 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.43□□□□□ -0.42
Traf1P39428 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.43□□□□□ -0.42
Traf1P39428 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.43□□□□□ -0.42
Traf1P39428 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.43□□□□□ -0.42
Traf1P39428 Gm45094-201ENSMUST00000207013 617 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Gm18466-201ENSMUST00000209147 499 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Gm18001-201ENSMUST00000212023 688 ntBASIC12.43□□□□□ -0.42
Traf1P39428 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Traf1P39428 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.43□□□□□ -0.42
Traf1P39428 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Traf1P39428 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Traf1P39428 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Traf1P39428 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Traf1P39428 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.42□□□□□ -0.42
Traf1P39428 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Traf1P39428 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Traf1P39428 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Traf1P39428 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Traf1P39428 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Traf1P39428 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.42□□□□□ -0.42
Traf1P39428 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.42□□□□□ -0.42
Traf1P39428 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Traf1P39428 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.42□□□□□ -0.42
Traf1P39428 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms