Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Cd28P31041 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Cd28P31041 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Cd28P31041 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.33□□□□□ -0.92
Cd28P31041 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Cd28P31041 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Cd28P31041 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.33□□□□□ -0.92
Cd28P31041 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Cd28P31041 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Cd28P31041 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Gm11956-201ENSMUST00000119525 512 ntBASIC9.33□□□□□ -0.92
Cd28P31041 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.33□□□□□ -0.92
Cd28P31041 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.33□□□□□ -0.92
Cd28P31041 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Gm7584-201ENSMUST00000175829 940 ntBASIC9.33□□□□□ -0.92
Cd28P31041 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.33□□□□□ -0.92
Cd28P31041 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Cd28P31041 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.33□□□□□ -0.92
Cd28P31041 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.33□□□□□ -0.92
Cd28P31041 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.33□□□□□ -0.92
Cd28P31041 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Cd28P31041 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Cd28P31041 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.33□□□□□ -0.92
Cd28P31041 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cd28P31041 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cd28P31041 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.32□□□□□ -0.92
Cd28P31041 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Gm12419-201ENSMUST00000116649 636 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Gm14395-201ENSMUST00000120494 563 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Gm13350-201ENSMUST00000120519 479 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cd28P31041 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.32□□□□□ -0.92
Cd28P31041 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.32□□□□□ -0.92
Cd28P31041 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Gm17040-202ENSMUST00000170597 889 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Gm29543-201ENSMUST00000188138 967 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.32□□□□□ -0.92
Cd28P31041 Gm44315-201ENSMUST00000203041 219 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Gm44420-201ENSMUST00000203669 490 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Gm44551-201ENSMUST00000208804 171 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Mt1-202ENSMUST00000211807 1085 ntBASIC9.32□□□□□ -0.92
Cd28P31041 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.32□□□□□ -0.92
Cd28P31041 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.32□□□□□ -0.92
Cd28P31041 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.32□□□□□ -0.92
Cd28P31041 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cd28P31041 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.32□□□□□ -0.92
Cd28P31041 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cd28P31041 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cd28P31041 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms