Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nedd8P29595 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Psat1-201ENSMUST00000025542 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Phf8-206ENSMUST00000112670 3484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Nedd8P29595 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nedd8P29595 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Gm15285-201ENSMUST00000119271 473 ntBASIC9.74□□□□□ -0.85
Nedd8P29595 Gm12490-201ENSMUST00000120255 560 ntBASIC9.74□□□□□ -0.85
Nedd8P29595 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.74□□□□□ -0.85
Nedd8P29595 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.74□□□□□ -0.85
Nedd8P29595 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Nedd8P29595 Gm44651-201ENSMUST00000207343 372 ntBASIC9.74□□□□□ -0.85
Nedd8P29595 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.74□□□□□ -0.85
Nedd8P29595 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.74□□□□□ -0.85
Nedd8P29595 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.74□□□□□ -0.85
Nedd8P29595 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nedd8P29595 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Gm45139-201ENSMUST00000206543 2057 ntBASIC9.74□□□□□ -0.85
Nedd8P29595 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nedd8P29595 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC9.74□□□□□ -0.85
Nedd8P29595 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nedd8P29595 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Nedd8P29595 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Kcnh6-201ENSMUST00000001965 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Mpp2-201ENSMUST00000017458 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.73□□□□□ -0.85
Nedd8P29595 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.73□□□□□ -0.85
Nedd8P29595 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm15370-201ENSMUST00000117158 253 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Gm12857-201ENSMUST00000117678 592 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Gm14660-201ENSMUST00000119809 575 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Gm13786-201ENSMUST00000122371 333 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Gm5616-201ENSMUST00000165252 384 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm8741-201ENSMUST00000174736 384 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm8885-201ENSMUST00000189382 598 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Gm37020-201ENSMUST00000195303 992 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm21811-201ENSMUST00000096485 930 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm43366-201ENSMUST00000199829 2655 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 AC154176.2-201ENSMUST00000225376 6429 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.73□□□□□ -0.85
Nedd8P29595 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC9.73□□□□□ -0.85
Nedd8P29595 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Nedd8P29595 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nedd8P29595 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Stard13-208ENSMUST00000202111 3373 ntTSL 5 BASIC9.72□□□□□ -0.85
Nedd8P29595 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Nedd8P29595 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nedd8P29595 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms