Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Mir3100-201ENSMUST00000174918 65 ntBASIC12.95□□□□□ -0.34
NpcdF8VQB8 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Gm44173-201ENSMUST00000204316 132 ntBASIC12.95□□□□□ -0.34
NpcdF8VQB8 Gm8170-201ENSMUST00000218581 945 ntBASIC12.95□□□□□ -0.34
NpcdF8VQB8 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Gm8420-201ENSMUST00000097103 598 ntBASIC12.95□□□□□ -0.34
NpcdF8VQB8 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NpcdF8VQB8 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm13758-201ENSMUST00000118699 743 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm20474-201ENSMUST00000180089 596 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm42908-201ENSMUST00000197508 870 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm19228-201ENSMUST00000214030 717 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm8796-201ENSMUST00000219122 936 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 AC124772.3-201ENSMUST00000222535 575 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm9790-201ENSMUST00000054148 288 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.94□□□□□ -0.34
NpcdF8VQB8 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NpcdF8VQB8 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm12047-201ENSMUST00000117561 944 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm15132-201ENSMUST00000118581 652 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm13002-201ENSMUST00000119286 682 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm8824-201ENSMUST00000182962 990 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm43002-201ENSMUST00000200310 155 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm44388-201ENSMUST00000204350 258 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm8162-201ENSMUST00000213951 665 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms