Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga4Q91XY4 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga4Q91XY4 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga4Q91XY4 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga4Q91XY4 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdhga4Q91XY4 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm6158-201ENSMUST00000109467 904 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm11952-201ENSMUST00000121172 821 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm5529-201ENSMUST00000165691 891 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Platr10-202ENSMUST00000191479 818 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm8255-201ENSMUST00000218693 305 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga4Q91XY4 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm12389-201ENSMUST00000117696 418 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm22119-201ENSMUST00000175594 99 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Gm18514-201ENSMUST00000218980 436 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdhga4Q91XY4 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms