Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm5178-201ENSMUST00000219380 898 ntBASIC10.11□□□□□ -0.79
Clrn1Q8K445 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm16380-201ENSMUST00000077997 478 ntBASIC10.11□□□□□ -0.79
Clrn1Q8K445 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.11□□□□□ -0.79
Clrn1Q8K445 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.1□□□□□ -0.79
Clrn1Q8K445 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.1□□□□□ -0.79
Clrn1Q8K445 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Gm26119-201ENSMUST00000175601 104 ntBASIC10.1□□□□□ -0.79
Clrn1Q8K445 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.1□□□□□ -0.79
Clrn1Q8K445 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Clrn1Q8K445 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm23061-201ENSMUST00000102348 116 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm6425-201ENSMUST00000136332 790 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm25830-201ENSMUST00000158923 132 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm28324-201ENSMUST00000187913 264 ntBASIC10.09□□□□□ -0.79
Clrn1Q8K445 Gm37365-201ENSMUST00000193109 409 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms