Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc38Q8CDN8 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Gm2875-201ENSMUST00000211333 360 ntBASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Gm37307-201ENSMUST00000193663 2621 ntBASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc38Q8CDN8 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gm11411-201ENSMUST00000117951 719 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gm44329-201ENSMUST00000197469 112 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.93□□□□□ -0.5
Ccdc38Q8CDN8 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms