Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli3Q61602 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gli3Q61602 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli3Q61602 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli3Q61602 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli3Q61602 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Gli3Q61602 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gli3Q61602 Gm28624-201ENSMUST00000186430 2131 ntBASIC14.11□□□□□ -0.15
Gli3Q61602 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gli3Q61602 Dcstamp-204ENSMUST00000227792 1367 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Gli3Q61602 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Rhox12-202ENSMUST00000115146 561 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Gli3Q61602 Gm23368-201ENSMUST00000116939 96 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Mfap5-202ENSMUST00000118626 748 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Gli3Q61602 Gm12250-201ENSMUST00000119467 1274 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Gm16077-201ENSMUST00000121915 655 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC14.1□□□□□ -0.15
Gli3Q61602 Gm9637-201ENSMUST00000179141 873 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Gm38320-201ENSMUST00000192767 1281 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Gm6069-201ENSMUST00000196501 463 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 AC157650.1-201ENSMUST00000224582 610 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gli3Q61602 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gli3Q61602 Gm25129-201ENSMUST00000082651 133 ntBASIC14.1□□□□□ -0.15
Gli3Q61602 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Gli3Q61602 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC14.1□□□□□ -0.15
Gli3Q61602 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gli3Q61602 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC14.1□□□□□ -0.15
Gli3Q61602 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gli3Q61602 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm35618-201ENSMUST00000223164 1606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Olfr122-201ENSMUST00000119082 993 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm12192-201ENSMUST00000120146 487 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm6073-201ENSMUST00000198253 466 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC14.09□□□□□ -0.15
Gli3Q61602 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm44978-201ENSMUST00000206635 317 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm16475-202ENSMUST00000209033 528 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 4930473H19Rik-202ENSMUST00000222124 1000 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm33351-202ENSMUST00000215428 1677 ntTSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 AC149588.2-201ENSMUST00000228182 1859 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm43225-201ENSMUST00000201381 1439 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm43869-201ENSMUST00000204742 1405 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Ccl19-201ENSMUST00000102957 745 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm25842-201ENSMUST00000122590 322 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 1810019D21Rik-203ENSMUST00000145343 984 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC14.09□□□□□ -0.15
Gli3Q61602 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Gm8992-201ENSMUST00000204463 502 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 AC154548.2-201ENSMUST00000224621 469 ntBASIC14.09□□□□□ -0.15
Gli3Q61602 Cryaa-206ENSMUST00000228716 1117 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gli3Q61602 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gli3Q61602 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gli3Q61602 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gli3Q61602 Ccdc146-201ENSMUST00000030552 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gli3Q61602 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gli3Q61602 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Gli3Q61602 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gli3Q61602 Zfp819-202ENSMUST00000116324 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gli3Q61602 Gm46992-201ENSMUST00000222120 1389 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms