Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
GabpaQ00422 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
GabpaQ00422 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
GabpaQ00422 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
GabpaQ00422 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
GabpaQ00422 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
GabpaQ00422 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
GabpaQ00422 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
GabpaQ00422 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Snora68-201ENSMUST00000104375 131 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.14□□□□□ -0.47
GabpaQ00422 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Gm8482-201ENSMUST00000117972 471 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Gm13841-201ENSMUST00000118829 483 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Gm11449-201ENSMUST00000119175 476 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.14□□□□□ -0.47
GabpaQ00422 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.14□□□□□ -0.47
GabpaQ00422 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Gm8210-201ENSMUST00000178557 483 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Gm15454-201ENSMUST00000179718 483 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Mir6359-201ENSMUST00000183668 81 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.14□□□□□ -0.47
GabpaQ00422 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.14□□□□□ -0.47
GabpaQ00422 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Gm6344-201ENSMUST00000075962 483 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.14□□□□□ -0.47
GabpaQ00422 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GabpaQ00422 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
GabpaQ00422 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm14006-201ENSMUST00000122132 981 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.13□□□□□ -0.47
GabpaQ00422 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
GabpaQ00422 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm9515-201ENSMUST00000200276 647 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Gm43811-201ENSMUST00000202862 695 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.13□□□□□ -0.47
GabpaQ00422 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm8557-201ENSMUST00000220777 475 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
GabpaQ00422 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
GabpaQ00422 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.13□□□□□ -0.47
GabpaQ00422 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.13□□□□□ -0.47
GabpaQ00422 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GabpaQ00422 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.12□□□□□ -0.47
GabpaQ00422 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GabpaQ00422 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms