Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.07□□□□□ -0.64
Nfkb1P25799 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.07□□□□□ -0.64
Nfkb1P25799 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm25288-201ENSMUST00000122800 265 ntBASIC11.07□□□□□ -0.64
Nfkb1P25799 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.07□□□□□ -0.64
Nfkb1P25799 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm18515-201ENSMUST00000219755 797 ntBASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm25514-201ENSMUST00000083860 135 ntBASIC11.07□□□□□ -0.64
Nfkb1P25799 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.07□□□□□ -0.64
Nfkb1P25799 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nfkb1P25799 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.07□□□□□ -0.64
Nfkb1P25799 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Nfkb1P25799 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.07□□□□□ -0.64
Nfkb1P25799 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.06□□□□□ -0.64
Nfkb1P25799 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.06□□□□□ -0.64
Nfkb1P25799 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.06□□□□□ -0.64
Nfkb1P25799 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nfkb1P25799 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm18010-201ENSMUST00000203553 202 ntBASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm18001-201ENSMUST00000212023 688 ntBASIC11.06□□□□□ -0.64
Nfkb1P25799 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Nfkb1P25799 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.06□□□□□ -0.64
Nfkb1P25799 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.06□□□□□ -0.64
Nfkb1P25799 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nfkb1P25799 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.05□□□□□ -0.64
Nfkb1P25799 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Nfkb1P25799 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nfkb1P25799 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nfkb1P25799 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Mir671-201ENSMUST00000102432 98 ntBASIC11.05□□□□□ -0.64
Nfkb1P25799 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.05□□□□□ -0.64
Nfkb1P25799 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.05□□□□□ -0.64
Nfkb1P25799 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.05□□□□□ -0.64
Nfkb1P25799 Gm5526-201ENSMUST00000153604 423 ntBASIC11.05□□□□□ -0.64
Nfkb1P25799 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.05□□□□□ -0.64
Nfkb1P25799 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.05□□□□□ -0.64
Nfkb1P25799 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nfkb1P25799 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.05□□□□□ -0.64
Nfkb1P25799 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms