Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm39481-201ENSMUST00000210379 512 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm18646-201ENSMUST00000212240 1063 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm18362-201ENSMUST00000221786 529 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm8055-201ENSMUST00000099956 1008 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Gm36638-202ENSMUST00000192073 2169 ntBASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccdc188F6WEU2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm43165-201ENSMUST00000200842 1635 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm12619-201ENSMUST00000117369 385 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm14278-201ENSMUST00000117381 878 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm14323-201ENSMUST00000122418 627 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Mir6354-201ENSMUST00000184979 116 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm37559-201ENSMUST00000193556 832 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm7424-201ENSMUST00000206919 902 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm22982-201ENSMUST00000082613 319 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Gm4925-201ENSMUST00000092231 397 ntBASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc188F6WEU2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Btrc-209ENSMUST00000224478 2194 ntBASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc188F6WEU2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms