Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ush1cQ9ES64 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Gm11663-201ENSMUST00000117888 290 ntBASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Gm18038-201ENSMUST00000197900 485 ntBASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Gm6867-201ENSMUST00000219165 425 ntBASIC12.24□□□□□ -0.45
Ush1cQ9ES64 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Gm37032-201ENSMUST00000194882 2975 ntBASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ush1cQ9ES64 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm44926-201ENSMUST00000207898 1826 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Snord17-201ENSMUST00000104526 238 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm18734-201ENSMUST00000172937 808 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Mir7677-201ENSMUST00000184226 67 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm270-201ENSMUST00000223010 976 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Gm45797-201ENSMUST00000212759 1921 ntBASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ush1cQ9ES64 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ush1cQ9ES64 Gm26670-201ENSMUST00000180429 3287 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms