Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm5244-201ENSMUST00000164001 339 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm26943-201ENSMUST00000182295 957 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm7255-201ENSMUST00000187371 908 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm37597-201ENSMUST00000191853 382 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm29808-201ENSMUST00000194419 468 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm5302-201ENSMUST00000202130 796 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm42689-201ENSMUST00000202403 404 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm7904-201ENSMUST00000217049 465 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm8730-201ENSMUST00000076373 954 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm8420-201ENSMUST00000097103 598 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rrp8Q9DB85 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.55□□□□□ -0.72
Rrp8Q9DB85 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm6939-201ENSMUST00000122029 864 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm17782-201ENSMUST00000174345 880 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm18466-201ENSMUST00000209147 499 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rrp8Q9DB85 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rrp8Q9DB85 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rrp8Q9DB85 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rrp8Q9DB85 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms