Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm12274-201ENSMUST00000120062 385 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm13937-201ENSMUST00000121000 988 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.29□□□□□ -0.6
Usp11Q99K46 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm34023-201ENSMUST00000195539 217 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm39288-201ENSMUST00000210554 446 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm20796-201ENSMUST00000180355 5838 ntBASIC11.29□□□□□ -0.6
Usp11Q99K46 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Usp11Q99K46 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm13117-201ENSMUST00000120894 691 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm15744-201ENSMUST00000161734 213 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Mir6407-201ENSMUST00000184510 101 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms