Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm22379-201ENSMUST00000157480 131 ntBASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm15744-201ENSMUST00000161734 213 ntBASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Mir8091-201ENSMUST00000183602 139 ntBASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm8365-201ENSMUST00000197334 648 ntBASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm6425-201ENSMUST00000136332 790 ntBASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Mir1956-201ENSMUST00000157748 65 ntBASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm9081-201ENSMUST00000182346 991 ntBASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm3726-201ENSMUST00000203110 785 ntBASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim29Q8R2Q0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm14807-201ENSMUST00000116640 983 ntBASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm12791-201ENSMUST00000120788 655 ntBASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm16030-201ENSMUST00000159098 603 ntBASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms