Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.12□□□□□ -0.79
Clrn1Q8K445 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Mir1905-201ENSMUST00000122779 82 ntBASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm18968-201ENSMUST00000221319 862 ntBASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.12□□□□□ -0.79
Clrn1Q8K445 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.12□□□□□ -0.79
Clrn1Q8K445 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.12□□□□□ -0.79
Clrn1Q8K445 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Clrn1Q8K445 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.12□□□□□ -0.79
Clrn1Q8K445 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.11□□□□□ -0.79
Clrn1Q8K445 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm25562-201ENSMUST00000104608 133 ntBASIC10.11□□□□□ -0.79
Clrn1Q8K445 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm20392-201ENSMUST00000173047 701 ntBASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm9135-201ENSMUST00000182963 990 ntBASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.11□□□□□ -0.79
Clrn1Q8K445 Gm43097-201ENSMUST00000196867 151 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms