Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 CT009713.3-201ENSMUST00000224987 1565 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm8955-201ENSMUST00000182945 1008 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm31941-201ENSMUST00000209689 350 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm18646-201ENSMUST00000212240 1063 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm26440-201ENSMUST00000082591 129 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm16581-201ENSMUST00000160730 991 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm8203-201ENSMUST00000173192 387 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm6967-201ENSMUST00000182599 1007 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm4866-201ENSMUST00000197408 589 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm5905-201ENSMUST00000211731 580 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 AC154766.1-201ENSMUST00000226550 936 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm8256-202ENSMUST00000227964 828 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm9790-201ENSMUST00000054148 288 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Gm20953-201ENSMUST00000216399 2614 ntBASIC12.43□□□□□ -0.42
Nup98Q6PFD9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm9864-201ENSMUST00000090043 1656 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Mir744-201ENSMUST00000103261 100 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm8864-201ENSMUST00000118653 1010 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm15373-201ENSMUST00000121495 214 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm38007-201ENSMUST00000192187 313 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gm37009-201ENSMUST00000193297 361 ntBASIC12.42□□□□□ -0.42
Nup98Q6PFD9 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms