Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Mir6953-201ENSMUST00000184745 68 ntBASIC12.17□□□□□ -0.46
GabpaQ00422 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.17□□□□□ -0.46
GabpaQ00422 Gm37301-201ENSMUST00000195412 568 ntBASIC12.17□□□□□ -0.46
GabpaQ00422 Gm44155-201ENSMUST00000203923 412 ntBASIC12.17□□□□□ -0.46
GabpaQ00422 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.17□□□□□ -0.46
GabpaQ00422 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
GabpaQ00422 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
GabpaQ00422 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
GabpaQ00422 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.17□□□□□ -0.46
GabpaQ00422 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.17□□□□□ -0.46
GabpaQ00422 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GabpaQ00422 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.16□□□□□ -0.46
GabpaQ00422 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
GabpaQ00422 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.16□□□□□ -0.46
GabpaQ00422 Gm23439-201ENSMUST00000104292 132 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 Gm24140-201ENSMUST00000122773 326 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.16□□□□□ -0.46
GabpaQ00422 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.16□□□□□ -0.46
GabpaQ00422 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.16□□□□□ -0.46
GabpaQ00422 Gm42859-201ENSMUST00000199572 193 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.16□□□□□ -0.46
GabpaQ00422 Gm8796-201ENSMUST00000219122 936 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.16□□□□□ -0.46
GabpaQ00422 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
GabpaQ00422 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
GabpaQ00422 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
GabpaQ00422 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GabpaQ00422 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.15□□□□□ -0.46
GabpaQ00422 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
GabpaQ00422 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
GabpaQ00422 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
GabpaQ00422 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm15707-201ENSMUST00000118804 996 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Gm9166-201ENSMUST00000120293 561 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm7765-201ENSMUST00000182585 974 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
GabpaQ00422 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.15□□□□□ -0.46
GabpaQ00422 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm8643-201ENSMUST00000195228 625 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
GabpaQ00422 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm45893-201ENSMUST00000211899 247 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Gm8894-201ENSMUST00000074642 666 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
GabpaQ00422 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.15□□□□□ -0.46
GabpaQ00422 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GabpaQ00422 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms