Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hmgb1P63158 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm3828-201ENSMUST00000121817 257 ntBASIC11.87□□□□□ -0.51
Hmgb1P63158 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hmgb1P63158 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm7467-201ENSMUST00000185173 652 ntBASIC11.87□□□□□ -0.51
Hmgb1P63158 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.87□□□□□ -0.51
Hmgb1P63158 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.87□□□□□ -0.51
Hmgb1P63158 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.87□□□□□ -0.51
Hmgb1P63158 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgb1P63158 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgb1P63158 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm13611-201ENSMUST00000118269 318 ntBASIC11.86□□□□□ -0.51
Hmgb1P63158 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm28064-201ENSMUST00000185639 858 ntBASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm45310-201ENSMUST00000210436 275 ntBASIC11.86□□□□□ -0.51
Hmgb1P63158 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm8162-201ENSMUST00000213951 665 ntBASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.86□□□□□ -0.51
Hmgb1P63158 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.86□□□□□ -0.51
Hmgb1P63158 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hmgb1P63158 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.86□□□□□ -0.51
Hmgb1P63158 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgb1P63158 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 AC138284.4-201ENSMUST00000216704 2882 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm16518-201ENSMUST00000117960 508 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm11246-201ENSMUST00000120880 345 ntBASIC11.85□□□□□ -0.51
Hmgb1P63158 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmgb1P63158 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms