Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm3508-201ENSMUST00000186012 792 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.06□□□□□ -0.48
Rrp1P56183 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm33080-201ENSMUST00000205429 172 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rrp1P56183 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Rrp1P56183 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp1P56183 Gm26670-201ENSMUST00000180429 3287 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rrp1P56183 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.06□□□□□ -0.48
Rrp1P56183 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.06□□□□□ -0.48
Rrp1P56183 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rrp1P56183 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rrp1P56183 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.05□□□□□ -0.48
Rrp1P56183 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Rrp1P56183 Gm15131-201ENSMUST00000119124 595 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 Gm11824-201ENSMUST00000120191 846 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 Gm10731-201ENSMUST00000181171 448 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 Gm29543-201ENSMUST00000188138 967 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rrp1P56183 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.05□□□□□ -0.48
Rrp1P56183 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC12.05□□□□□ -0.48
Rrp1P56183 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rrp1P56183 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp1P56183 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.05□□□□□ -0.48
Rrp1P56183 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Rrp1P56183 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rrp1P56183 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Gm15285-201ENSMUST00000119271 473 ntBASIC12.04□□□□□ -0.48
Rrp1P56183 Gm12176-201ENSMUST00000121420 875 ntBASIC12.04□□□□□ -0.48
Rrp1P56183 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Mir6546-201ENSMUST00000184460 62 ntBASIC12.04□□□□□ -0.48
Rrp1P56183 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrp1P56183 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.04□□□□□ -0.48
Rrp1P56183 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.04□□□□□ -0.48
Rrp1P56183 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.04□□□□□ -0.48
Rrp1P56183 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Rrp1P56183 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rrp1P56183 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rrp1P56183 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Gm9220-201ENSMUST00000190721 2544 ntBASIC12.04□□□□□ -0.48
Rrp1P56183 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrp1P56183 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rrp1P56183 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp1P56183 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rrp1P56183 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrp1P56183 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrp1P56183 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms