Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Gm7572-201ENSMUST00000182616 766 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Gm27316-201ENSMUST00000184884 277 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Gm37197-201ENSMUST00000195607 401 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.2□□□□□ -0.78
Nkx2-6P43688 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nkx2-6P43688 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm26313-201ENSMUST00000157770 308 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm20493-201ENSMUST00000173706 213 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm11942-201ENSMUST00000180255 345 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm43097-201ENSMUST00000196867 151 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm44487-201ENSMUST00000205145 325 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 Gm8170-201ENSMUST00000218581 945 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.19□□□□□ -0.78
Nkx2-6P43688 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Nkx2-6P43688 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm24933-201ENSMUST00000103762 110 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm23252-201ENSMUST00000103776 110 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-6P43688 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm13827-201ENSMUST00000148801 372 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm26443-201ENSMUST00000179610 110 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm7627-201ENSMUST00000183205 999 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Mir8111-201ENSMUST00000184463 137 ntBASIC10.18□□□□□ -0.78
Nkx2-6P43688 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms