Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Traf1P39428 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.49□□□□□ -0.41
Traf1P39428 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.49□□□□□ -0.41
Traf1P39428 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.49□□□□□ -0.41
Traf1P39428 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Gm24312-201ENSMUST00000178677 119 ntBASIC12.49□□□□□ -0.41
Traf1P39428 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.49□□□□□ -0.41
Traf1P39428 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Gm43097-201ENSMUST00000196867 151 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Gm45258-201ENSMUST00000210042 853 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.49□□□□□ -0.41
Traf1P39428 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.49□□□□□ -0.41
Traf1P39428 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Traf1P39428 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Traf1P39428 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.49□□□□□ -0.41
Traf1P39428 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Traf1P39428 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.49□□□□□ -0.41
Traf1P39428 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Traf1P39428 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Traf1P39428 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Gm12943-201ENSMUST00000119616 210 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Gm14113-201ENSMUST00000121399 976 ntBASIC12.48□□□□□ -0.41
Traf1P39428 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.48□□□□□ -0.41
Traf1P39428 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Gm25226-201ENSMUST00000158198 123 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Gm43506-201ENSMUST00000200675 753 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Gm29763-201ENSMUST00000205306 616 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.48□□□□□ -0.41
Traf1P39428 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Traf1P39428 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Traf1P39428 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.47□□□□□ -0.41
Traf1P39428 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Traf1P39428 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.47□□□□□ -0.41
Traf1P39428 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.47□□□□□ -0.41
Traf1P39428 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Traf1P39428 Gm22594-201ENSMUST00000104251 130 ntBASIC12.47□□□□□ -0.41
Traf1P39428 Gm12947-201ENSMUST00000116114 420 ntBASIC12.47□□□□□ -0.41
Traf1P39428 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.47□□□□□ -0.41
Traf1P39428 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms