Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm12906-201ENSMUST00000154610 441 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm25226-201ENSMUST00000158198 123 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm5244-201ENSMUST00000164001 339 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm6606-201ENSMUST00000193613 947 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm37782-201ENSMUST00000194879 678 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm43547-201ENSMUST00000197729 328 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm19640-201ENSMUST00000214849 464 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nfkb1P25799 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Nfkb1P25799 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm11919-201ENSMUST00000117609 721 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm12948-201ENSMUST00000119406 682 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm9625-201ENSMUST00000180422 955 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Mir6387-201ENSMUST00000184042 108 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.08□□□□□ -0.64
Nfkb1P25799 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nfkb1P25799 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nfkb1P25799 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.07□□□□□ -0.64
Nfkb1P25799 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nfkb1P25799 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nfkb1P25799 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms