Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Snora68-201ENSMUST00000104375 131 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Platr10-202ENSMUST00000191479 818 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm9353-201ENSMUST00000200472 604 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm8960-201ENSMUST00000219787 788 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 AC174647.1-201ENSMUST00000227419 1271 ntBASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
NpcdF8VQB8 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NpcdF8VQB8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 H2afy3-201ENSMUST00000151919 1112 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm25154-201ENSMUST00000157123 119 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Tspy-ps-203ENSMUST00000186546 989 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm8525-201ENSMUST00000189674 861 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm5845-201ENSMUST00000195812 796 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm7815-201ENSMUST00000196104 832 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm9523-201ENSMUST00000199146 1159 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Gm18621-201ENSMUST00000222677 679 ntBASIC12.98□□□□□ -0.33
NpcdF8VQB8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NpcdF8VQB8 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.97□□□□□ -0.33
NpcdF8VQB8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NpcdF8VQB8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NpcdF8VQB8 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.97□□□□□ -0.33
NpcdF8VQB8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms