Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Syngap1F6SEU4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Syngap1F6SEU4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Syngap1F6SEU4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Syngap1F6SEU4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.15□□□□□ -0.47
Syngap1F6SEU4 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.15□□□□□ -0.47
Syngap1F6SEU4 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm6939-201ENSMUST00000122029 864 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Mir1941-201ENSMUST00000157834 83 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm19927-201ENSMUST00000185792 781 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm5254-201ENSMUST00000188353 977 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm37009-201ENSMUST00000193297 361 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm5851-201ENSMUST00000194132 1204 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm8643-201ENSMUST00000195228 625 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm9353-201ENSMUST00000200472 604 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Syngap1F6SEU4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Mir1249-201ENSMUST00000116791 98 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Gm19918-201ENSMUST00000194858 400 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Gm42867-201ENSMUST00000202995 469 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 AL844586.1-201ENSMUST00000224297 1042 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 AC159006.3-201ENSMUST00000226918 664 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syngap1F6SEU4 AU015228-201ENSMUST00000121103 1320 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms