Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf6Q9DBU5 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm17192-201ENSMUST00000169031 511 ntBASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf6Q9DBU5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm22876-201ENSMUST00000175450 298 ntBASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm7319-201ENSMUST00000210047 778 ntBASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Gm3619-201ENSMUST00000219947 775 ntBASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf6Q9DBU5 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms