Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm25053-201ENSMUST00000103982 133 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm25922-201ENSMUST00000104281 130 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm14165-201ENSMUST00000121456 952 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm24679-201ENSMUST00000158762 111 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm26119-201ENSMUST00000175601 104 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm28746-201ENSMUST00000187453 380 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm40414-201ENSMUST00000197608 481 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm25053-202ENSMUST00000199731 132 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Gm5178-201ENSMUST00000219380 898 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp2aQ9DB34 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp2aQ9DB34 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm11560-201ENSMUST00000117567 948 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm8723-201ENSMUST00000166076 820 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm8701-201ENSMUST00000169259 874 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm29155-201ENSMUST00000185910 269 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chmp2aQ9DB34 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms