Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm2594-201ENSMUST00000214774 742 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gm18968-201ENSMUST00000221319 862 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trub1Q8C0D0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Mir1905-201ENSMUST00000122779 82 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm22876-201ENSMUST00000175450 298 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Mir7035-201ENSMUST00000184713 82 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm28833-201ENSMUST00000189671 559 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm42780-201ENSMUST00000197083 734 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gm5881-201ENSMUST00000204737 367 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trub1Q8C0D0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gm20781-201ENSMUST00000193154 693 ntBASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gm21736-201ENSMUST00000195399 693 ntBASIC11.04□□□□□ -0.64
Trub1Q8C0D0 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms