Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm20474-201ENSMUST00000180089 596 ntBASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Spin3-ps-201ENSMUST00000192825 770 ntBASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Gm45527-201ENSMUST00000211052 774 ntBASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.45□□□□□ -0.42
Nup98Q6PFD9 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Gm3687-201ENSMUST00000161710 460 ntBASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 AC174647.1-201ENSMUST00000227419 1271 ntBASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Gm44907-201ENSMUST00000207423 1633 ntBASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nup98Q6PFD9 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm24161-201ENSMUST00000104592 130 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm12345-201ENSMUST00000119288 898 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm13281-201ENSMUST00000120871 567 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm4462-201ENSMUST00000166453 492 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm3889-201ENSMUST00000212467 612 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm8991-201ENSMUST00000073014 1075 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm4883-201ENSMUST00000085702 528 ntBASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup98Q6PFD9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms