Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm8019-201ENSMUST00000119317 587 ntBASIC11.65□□□□□ -0.54
Col9a2Q07643 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a2Q07643 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Col9a2Q07643 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.65□□□□□ -0.54
Col9a2Q07643 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.65□□□□□ -0.54
Col9a2Q07643 AC161172.1-201ENSMUST00000227801 486 ntBASIC11.65□□□□□ -0.54
Col9a2Q07643 AC141884.2-201ENSMUST00000228811 775 ntBASIC11.65□□□□□ -0.54
Col9a2Q07643 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Col9a2Q07643 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.65□□□□□ -0.54
Col9a2Q07643 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.65□□□□□ -0.54
Col9a2Q07643 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Col9a2Q07643 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a2Q07643 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a2Q07643 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a2Q07643 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col9a2Q07643 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Col9a2Q07643 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col9a2Q07643 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.64□□□□□ -0.55
Col9a2Q07643 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.64□□□□□ -0.55
Col9a2Q07643 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gm27441-201ENSMUST00000185000 105 ntBASIC11.64□□□□□ -0.55
Col9a2Q07643 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gm37141-201ENSMUST00000191938 422 ntBASIC11.64□□□□□ -0.55
Col9a2Q07643 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.64□□□□□ -0.55
Col9a2Q07643 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.64□□□□□ -0.55
Col9a2Q07643 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col9a2Q07643 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a2Q07643 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Col9a2Q07643 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col9a2Q07643 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col9a2Q07643 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col9a2Q07643 Mir291b-201ENSMUST00000104838 79 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.63□□□□□ -0.55
Col9a2Q07643 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Col9a2Q07643 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm27833-201ENSMUST00000184285 124 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC11.63□□□□□ -0.55
Col9a2Q07643 Gm29543-201ENSMUST00000188138 967 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms