Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm45663-201ENSMUST00000210429 1632 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm38034-201ENSMUST00000193915 2069 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm6713-201ENSMUST00000216137 1446 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm12684-201ENSMUST00000118675 999 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm5801-201ENSMUST00000182247 780 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Mir7088-201ENSMUST00000184227 86 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm18182-201ENSMUST00000191380 1251 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Smarcc1P97496 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm44388-201ENSMUST00000204350 258 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm38111-201ENSMUST00000194817 2741 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcc1P97496 Gm7701-201ENSMUST00000163185 1479 ntBASIC13.48□□□□□ -0.25
Smarcc1P97496 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcc1P97496 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 AC154640.1-203ENSMUST00000228316 1618 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm4865-201ENSMUST00000196284 1309 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Defa-ps17-201ENSMUST00000121849 171 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Mir3091-201ENSMUST00000175086 76 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Mir6396-201ENSMUST00000183603 111 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm9515-201ENSMUST00000200276 647 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms