Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Gm37759-201ENSMUST00000194155 3246 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Btrc-206ENSMUST00000224102 3037 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClgnP52194 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.03□□□□□ -0.64
ClgnP52194 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.64
ClgnP52194 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
ClgnP52194 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.02□□□□□ -0.64
ClgnP52194 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
ClgnP52194 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
ClgnP52194 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
ClgnP52194 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClgnP52194 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
ClgnP52194 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
ClgnP52194 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.02□□□□□ -0.65
ClgnP52194 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
ClgnP52194 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Gm14592-201ENSMUST00000117201 560 ntBASIC11.02□□□□□ -0.65
ClgnP52194 Gm12516-201ENSMUST00000120819 385 ntBASIC11.02□□□□□ -0.65
ClgnP52194 Gm13284-201ENSMUST00000121020 547 ntBASIC11.02□□□□□ -0.65
ClgnP52194 Gm22138-201ENSMUST00000158748 128 ntBASIC11.02□□□□□ -0.65
ClgnP52194 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.02□□□□□ -0.65
ClgnP52194 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.02□□□□□ -0.65
ClgnP52194 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.02□□□□□ -0.65
ClgnP52194 Gm44323-201ENSMUST00000198689 129 ntBASIC11.02□□□□□ -0.65
ClgnP52194 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.02□□□□□ -0.65
ClgnP52194 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.02□□□□□ -0.65
ClgnP52194 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ClgnP52194 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
ClgnP52194 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.02□□□□□ -0.65
ClgnP52194 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.02□□□□□ -0.65
ClgnP52194 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Gm42826-201ENSMUST00000197548 2639 ntBASIC11.02□□□□□ -0.65
ClgnP52194 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClgnP52194 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClgnP52194 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Gm42608-201ENSMUST00000197563 2018 ntBASIC11.01□□□□□ -0.65
ClgnP52194 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ClgnP52194 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Gm11451-201ENSMUST00000118946 630 ntBASIC11.01□□□□□ -0.65
ClgnP52194 Gm15131-201ENSMUST00000119124 595 ntBASIC11.01□□□□□ -0.65
ClgnP52194 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.01□□□□□ -0.65
ClgnP52194 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.01□□□□□ -0.65
ClgnP52194 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.01□□□□□ -0.65
ClgnP52194 Gm26134-201ENSMUST00000178484 110 ntBASIC11.01□□□□□ -0.65
ClgnP52194 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.01□□□□□ -0.65
ClgnP52194 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.01□□□□□ -0.65
ClgnP52194 Gm43947-201ENSMUST00000203019 959 ntBASIC11.01□□□□□ -0.65
ClgnP52194 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.01□□□□□ -0.65
ClgnP52194 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
ClgnP52194 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.01□□□□□ -0.65
ClgnP52194 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.01□□□□□ -0.65
ClgnP52194 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
ClgnP52194 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClgnP52194 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms