Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Shmt1P50431 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.37□□□□□ -0.59
Shmt1P50431 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Gm13039-201ENSMUST00000118638 794 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Gm11544-201ENSMUST00000120215 382 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Gm13981-201ENSMUST00000122360 447 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Gm6425-201ENSMUST00000136332 790 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Gm25677-201ENSMUST00000174983 72 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.37□□□□□ -0.59
Shmt1P50431 Gm18801-201ENSMUST00000186616 536 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Shmt1P50431 Gm43564-201ENSMUST00000196185 211 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shmt1P50431 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Shmt1P50431 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shmt1P50431 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.37□□□□□ -0.59
Shmt1P50431 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shmt1P50431 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shmt1P50431 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shmt1P50431 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Shmt1P50431 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.36□□□□□ -0.59
Shmt1P50431 Gm12943-201ENSMUST00000119616 210 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm12337-201ENSMUST00000119634 400 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm22344-201ENSMUST00000122642 278 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Shmt1P50431 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Shmt1P50431 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Gm23400-201ENSMUST00000174994 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm26463-201ENSMUST00000175065 101 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm24332-201ENSMUST00000175102 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm25959-201ENSMUST00000175112 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm22475-201ENSMUST00000175169 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm22903-201ENSMUST00000175193 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm25070-201ENSMUST00000175237 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm24159-201ENSMUST00000175264 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm25299-201ENSMUST00000175283 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm23798-201ENSMUST00000175560 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm23802-201ENSMUST00000175565 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm25708-201ENSMUST00000177687 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm24370-201ENSMUST00000178007 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm23049-201ENSMUST00000178068 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm28019-201ENSMUST00000178138 101 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm25571-201ENSMUST00000178322 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm25355-201ENSMUST00000178456 101 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm24975-201ENSMUST00000178492 101 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm23189-201ENSMUST00000178954 102 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm25100-201ENSMUST00000179750 101 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm23064-201ENSMUST00000179866 101 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm42433-201ENSMUST00000196806 940 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm42751-201ENSMUST00000198065 559 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm18466-201ENSMUST00000209147 499 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 BC106175-202ENSMUST00000219344 1213 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.36□□□□□ -0.59
Shmt1P50431 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms