Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NpcdF8VQB8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm5764-201ENSMUST00000118817 885 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm22662-201ENSMUST00000175290 256 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Mir6396-201ENSMUST00000183603 111 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm42803-201ENSMUST00000201051 451 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm43930-201ENSMUST00000203868 845 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm8615-201ENSMUST00000025307 771 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm17541-201ENSMUST00000080062 525 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.01□□□□□ -0.33
NpcdF8VQB8 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NpcdF8VQB8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NpcdF8VQB8 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
NpcdF8VQB8 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13□□□□□ -0.33
NpcdF8VQB8 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm37582-201ENSMUST00000192953 1409 ntBASIC13□□□□□ -0.33
NpcdF8VQB8 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm26379-201ENSMUST00000178125 138 ntBASIC13□□□□□ -0.33
NpcdF8VQB8 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm5274-201ENSMUST00000182641 1003 ntBASIC13□□□□□ -0.33
NpcdF8VQB8 Gm37102-201ENSMUST00000195740 1105 ntBASIC13□□□□□ -0.33
NpcdF8VQB8 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC13□□□□□ -0.33
NpcdF8VQB8 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NpcdF8VQB8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13□□□□□ -0.33
NpcdF8VQB8 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13□□□□□ -0.33
NpcdF8VQB8 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gm9544-201ENSMUST00000223349 2482 ntBASIC13□□□□□ -0.33
NpcdF8VQB8 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NpcdF8VQB8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
NpcdF8VQB8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NpcdF8VQB8 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms