Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm24471-201ENSMUST00000104485 131 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm9075-201ENSMUST00000168738 794 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm37819-201ENSMUST00000194626 1065 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm5194-201ENSMUST00000221457 742 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 AC154643.1-201ENSMUST00000225643 625 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 AC154683.1-201ENSMUST00000228409 1284 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 AC122459.4-201ENSMUST00000228654 551 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Ppp1r9a-206ENSMUST00000175962 3769 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 AC134898.1-201ENSMUST00000223738 1836 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm15602-201ENSMUST00000116162 465 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm4812-201ENSMUST00000182847 993 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm5881-201ENSMUST00000204737 367 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 AC140426.1-201ENSMUST00000227933 459 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 n-R5s5-201ENSMUST00000083134 119 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm10689-201ENSMUST00000098864 432 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Cog3-203ENSMUST00000227473 4197 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm6721-201ENSMUST00000218353 1445 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col4a6B1AVK5 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Col4a6B1AVK5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col4a6B1AVK5 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms