Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Chmp4bQ9D8B3 Gm37031-201ENSMUST00000195487 2530 ntBASIC13.58□□□□□ -0.23
Chmp4bQ9D8B3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Gm6425-201ENSMUST00000136332 790 ntBASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Mir8091-201ENSMUST00000183602 139 ntBASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Gm44155-201ENSMUST00000203923 412 ntBASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Gm8684-201ENSMUST00000195078 1564 ntBASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chmp4bQ9D8B3 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gm13182-201ENSMUST00000122241 312 ntBASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gm22442-201ENSMUST00000157256 144 ntBASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gm45594-201ENSMUST00000211717 241 ntBASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp4bQ9D8B3 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4bQ9D8B3 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms